PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr3g0480661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 192aa MW: 21145.5 Da PI: 9.8939 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56 | 6.8e-18 | 30 | 91 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L+el+++ r p+ e+++++ +l +++ ++V++WF N++a+e++ RcHm_v2.0_Chr3g0480661 30 STRWTPTTDQIRILKELYYNkgVRSPTVEQIQRICLQLkrygKIEGKNVFYWFGNHKARERQ 91 58****************97689*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 106.5 | 1.7e-34 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL+ely+ +G+r+P+ e+iqri +L++yGkie+kNVfyWF N+kaRerqk+ RcHm_v2.0_Chr3g0480661 29 SSTRWTPTTDQIRILKELYYnKGVRSPTVEQIQRICLQLKRYGKIEGKNVFYWFGNHKARERQKK 93 689***************9779*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MEPQTQQPTE DGGSNKAAGS SANMLCRRSS TRWTPTTDQI RILKELYYNK GVRSPTVEQI 60 QRICLQLKRY GKIEGKNVFY WFGNHKARER QKKRFTSDVH VPMQRSGLVG NGNAGVIAFN 120 RQMGNYGGYG SMNMEKSFRD CSISAGGGTS STGVGGSISH NFGSWVSCSV DPYSSSSYTT 180 STSTTFFGLN EE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 8e-36 | WOX family protein |