PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr3g0476121

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 302aa MW: 32938.2 Da PI: 6.4949

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr3g0476121	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	110.6	7.4e-35	18	72	7	61
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC +ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ RcHm_v2.0_Chr3g0476121 18 NCPRCGCSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 72 7***************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MERSGWKPND DHHHICPNCP RCGCSNTKFC YYNNYSLTQP RYFCKGCRRY WTKGGSLRNV 60 PVGGGCRKNR RGSRSLRLST NTTTATGSNN VNSGTIGHNS YGISSSLDPD STSSGESNQD 120 APPRIDLAVV YANFLNQKPV SRSSGSDQLP EFPGELNPGL DFSSCIANMN INAGSGSSIQ 180 LVEENGLNGS IGCHSTLSEN CGTINDHMYF GGLDPLIDHH QKHQDHSSDL VQYASSTHES 240 TDHFGLPPLP DQEVLWSSSH DQMMASPIMQ PTPVLGSEAH DPNLLNWSPL FDLPCNGTFS 300 RT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	1e-34	Dof family protein