PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr3g0455971 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 81aa MW: 9865.38 Da PI: 10.2616 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.9 | 7.2e-18 | 7 | 67 | 2 | 56 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+ +t++q+++L+el+ + p+ e+ ++++ +l +++ ++V++WFqN+Ra+ek RcHm_v2.0_Chr3g0455971 7 NTRWLPTRDQIRILKELYDDkgVKCPTVEQVQRITLQLkwygEIENKNVFYWFQNQRAREK 67 58*****************6569*************************************9 PP | |||||||
2 | Wus_type_Homeobox | 97.7 | 9.5e-32 | 6 | 69 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW Pt +Qi+iL+ely+ +G++ P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k RcHm_v2.0_Chr3g0455971 6 SNTRWLPTRDQIRILKELYDdKGVKCPTVEQVQRITLQLKWYGEIENKNVFYWFQNQRAREKLK 69 789****************999***************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence |
MHCKQSNTRW LPTRDQIRIL KELYDDKGVK CPTVEQVQRI TLQLKWYGEI ENKNVFYWFQ 60 NQRAREKLKN NKLTSDVQVP K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-26 | WOX family protein |