PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr3g0447511 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 160aa MW: 18701.7 Da PI: 10.3304 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 80.1 | 4.1e-25 | 1 | 80 | 10 | 90 |
FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +GF++r+++ ++sk++g+i+ rtfvCskeg+r++++++ +k+ ++ra tr+gC a+l +kk + gkw+vtk+ +eHnH+l RcHm_v2.0_Chr3g0447511 1 MGFNTRMNYLSRSKHDGTIIARTFVCSKEGYRKPDRRD-KKTVNPRAPTRVGCMAMLSIKKLNIGKWVVTKFIKEHNHALI 80 7**********************************999.9**************************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MGFNTRMNYL SRSKHDGTII ARTFVCSKEG YRKPDRRDKK TVNPRAPTRV GCMAMLSIKK 60 LNIGKWVVTK FIKEHNHALI ASKRPKGLIE DQIPDDKTKI EELTQELFLE RERSASLRKV 120 IDLLFEHIEE HTQDLSKKVQ YVVDKVKEIE SEGTDRHKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 4e-54 | FAR1 family protein |