PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0147511 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 212aa MW: 23520 Da PI: 4.7723 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 44.8 | 2.1e-14 | 33 | 91 | 5 | 57 |
SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +t+t++ql++L+el++ ++p+ e+++ + +l +++ ++V++WFqN +a+e++ RcHm_v2.0_Chr2g0147511 33 WTPTPDQLRILQELYYDraLKNPTPEQIQGICLHLkpygQIENKNVFFWFQNLKARERQ 91 99*************96579*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 89 | 4.8e-29 | 30 | 92 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++ WtPtp+Q++iL+ely+ ++l++P+ e+iq i +L+ yG+ie+kNVf+WFQN kaRerqk RcHm_v2.0_Chr2g0147511 30 NNWWTPTPDQLRILQELYYdRALKNPTPEQIQGICLHLKPYGQIENKNVFFWFQNLKARERQK 92 567**************9879*****************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MELQAQQPTE EGGSIQAAGS SANTPIRPTN NWWTPTPDQL RILQELYYDR ALKNPTPEQI 60 QGICLHLKPY GQIENKNVFF WFQNLKARER QKLREFRNVR VGGSLDLNFG STSSTDDGRS 120 IDLNFGSTGS TSTDRSIDLN FGLRVGYGID GSIMDKRGEY HQEIETLPLF PMHGEDIFGN 180 MKTTSEGGSG YGGGSRISLE LSLNSYGDAD MA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-23 | WOX family protein |