PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0140271 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 133aa MW: 15404.3 Da PI: 10.8072 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.4 | 3.3e-20 | 33 | 94 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+ R+++t+eq++ Leel+++ ++p+a+++++ +++l +++ ++V++WFqN+Ra+e++ RcHm_v2.0_Chr2g0140271 33 RSCRWNPTPEQIKDLEELYRSgIKTPTAQQIRQVTARLrnygRVEGKNVFYWFQNHRARERQ 94 578*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 110.6 | 8.7e-36 | 34 | 96 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 + RW+PtpeQik Leely+sG++tP++++i+++ta+L++yG++e+kNVfyWFQN++aRerqk+ RcHm_v2.0_Chr2g0140271 34 SCRWNPTPEQIKDLEELYRSGIKTPTAQQIRQVTARLRNYGRVEGKNVFYWFQNHRARERQKR 96 67***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
MYAVVPVMSD EQGRSSSGCF YSDKQPAAGA PRRSCRWNPT PEQIKDLEEL YRSGIKTPTA 60 QQIRQVTARL RNYGRVEGKN VFYWFQNHRA RERQKRRREL ISMHQSDTKQ QQQTLINSKI 120 TSLQKKESAG GTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01500.1 | 3e-27 | WOX family protein |