PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0131231 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | E2F/DP | ||||||||
Protein Properties | Length: 83aa MW: 9453.69 Da PI: 11.1996 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 39.5 | 9.4e-13 | 1 | 38 | 39 | 71 |
E2F_TDP 39 vknkrRRiYDilNVLealnliek.....kekneirwkg 71 +++k+RRiYD +NVL+++nliek + k+++rw g RcHm_v2.0_Chr2g0131231 1 MRTKVRRIYDTANVLSSVNLIEKthtvdSGKSAYRWLG 38 689********************9999999******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
MRTKVRRIYD TANVLSSVNL IEKTHTVDSG KSAYRWLGLN GRRDGLNLNS EPNLEQAKKR 60 SFGTNLTNSS SKRSKVMEKR VQD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 9e-17 | E2F/DP family protein |