PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0110671
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Dof
Protein Properties Length: 358aa    MW: 38109.9 Da    PI: 8.6512
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0110671genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.67.6e-403696262
                  zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                            +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+++
  RcHm_v2.0_Chr2g0110671 36 PEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKRVR 96
                            6899******************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MMSSDNTPAK KPADDTQQGG GGSGNSRKTT SSKAPPEQAL KCPRCDSPNT KFCYYNNYSL  60
TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR KNKRVRSSSS RLSCSLDSKD SGDSASDHMG  120
LKFFHGISPA MDFQLGGLSL PRLNHHPSSS SAVVTALYNN NNSQFSPYGD VSVTSGLTLD  180
PSGGASGNSS FMGFNYPLTL GSGSGGGVGF QQNNMNSSMS VHSSLASSIE SLSSINQDLH  240
WKLQQQRLSM LFGTTIAGDS QTQPSHKDMQ MNDLEKNQTA PILFQNLEIS KPKESTGGGD  300
TAATEWFFGN SYAPPPPVTP TPTNSGGNGG GNENNAGNWN THGVVQAWGD LQQYNALP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.13e-54Dof family protein