PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0104031

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 325aa MW: 34536.1 Da PI: 8.854

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0104031	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.2e-38	57	114	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+ RcHm_v2.0_Chr2g0104031 57 SENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKN 114 57899***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MIQELFGGAG FNTGGVGGGG ERKISISSSS TSLSPSPSPS SSTTTTTTAA AAATTNSENL 60 RCPRCDSANT KFCYYNNYNL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR KNKNGTMSTS 120 ISKTAVAGKL KTMASEIGRS GFGLGFDHEV QASPILWGSP QNSHILALLR SSTPNPNPNP 180 NVQLCTNSVK EEGGMNMIGS HMMSESSGAG NDAMTARTLG LDPLSSFWRN NQNVQPPHHH 240 QQQNGNFLLG HEVQSNQGIQ ELFQRLRSSS SSGSYYSHDL NNGVSSSSTS SILEAAPAVG 300 GELGYNWNPA FTWSDQLPTT NGAYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	3e-34	Dof family protein