PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0085401 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 94aa MW: 11207.9 Da PI: 11.161 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 51.1 | 2.2e-16 | 7 | 68 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R++ t +q+++ +el+++ r p+ e+ ++++ +l +++ ++V++WF N+Ra+ek+ RcHm_v2.0_Chr2g0085401 7 STRWATTYDQIRIFKELYYNegVRSPTVEQVQRISFQLkqygKIKSKNVFYWFRNHRAREKQ 68 58****************97789*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 94.1 | 1.2e-30 | 6 | 70 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW+ t +Qi+i +ely+ +G+r+P+ e++qri+ +L++yGki++kNVfyWF N++aRe+qk+ RcHm_v2.0_Chr2g0085401 6 SSTRWATTYDQIRIFKELYYnEGVRSPTVEQVQRISFQLKQYGKIKSKNVFYWFRNHRAREKQKK 70 689***************9779*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence |
MLCKRSSTRW ATTYDQIRIF KELYYNEGVR SPTVEQVQRI SFQLKQYGKI KSKNVFYWFR 60 NHRAREKQKK KRFTSDVPVP MQRSGLVGNG NGTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-30 | WOX family protein |