PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0384181
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family E2F/DP
Protein Properties Length: 334aa    MW: 37020.4 Da    PI: 5.6992
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0384181genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.69.1e-2878160271
                 E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                             ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  RcHm_v2.0_Chr1g0384181  78 NGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfsdpingvtspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 160
                             789********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGTRSQQPNR ADDDDDMPGA QSVSMSGSMG SPSSRSEQTP AGDNSSLRLN HPDVNGDDAG  60
SVGKKKKRGQ RAAGGDKNGR GLRQFSMKVC EKVESKGRTT YNEVADELVA EFSDPINGVT  120
SPDQQQYDEK NIRRRVYDAL NVLMAMDIIS KDKKEIQWKG LPRTSLNDIE ELKTERLGLR  180
GRIEKKAVYL QELEEQYVGL QNLIQRNEQL YCSGDAPSGG VSLPFILVQT RPHATVEVEI  240
SEDMQLVHFD FNSTPFELHD DNYVLKAMKF CERSQGDGNH GMTQNYVADG GEGSSMAAMY  300
QQQIPLPPMV NTPVRPPTSP PLPGIIKARV KHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-132E2F/DP family protein