PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0381791
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Dof
Protein Properties Length: 298aa    MW: 32654.9 Da    PI: 8.4705
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0381791genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.91e-383595262
                  zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                            k++al+cprC+st tkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rkn+k+s
  RcHm_v2.0_Chr1g0381791 35 KDQALNCPRCNSTTTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNNKRS 95
                            7899*****************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDTAHWPQGI GVVKSMGVEV SDSRPILERR GRPQKDQALN CPRCNSTTTK FCYYNNYSLS  60
QPRYFCKTCR RYWTEGGSLR NVPVGGGSRK NNKRSSTSSS SSPSTSNSSK KLAHHDLVMT  120
QQSADSQNPK IHQGQDLNLA YPPTSDQDYD HHSIFNPSSS RISTSSPHNL SAMELLKSTG  180
INASRGLMNS FMAPISVADS NTITMFSTGN HGFPNLQEFK PRLSFSLDGY ESGYGSLQGV  240
QDGTSHHHAR LLFPTDQDLK QIPSGTTNTT TSTEFEQNGG EGDHSGVYWN GMLGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46590.18e-44Dof family protein