PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr1g0381201 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 139aa MW: 16144.2 Da PI: 10.4595 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 46.8 | 5.1e-15 | 30 | 91 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+ +t++ +++L+elF++ r p+ e+ +++ +l +++ ++V++WF N+Ra+ek+ RcHm_v2.0_Chr1g0381201 30 STRWIPTTDHIRILKELFYNkgVRSPTIEQVQRICLQLkwygKIEFKNVYYWFVNQRAREKQ 91 58*****************7789*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 87.6 | 1.3e-28 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt++ i+iL+el++ +G+r+P+ e++qri +L+ yGkie kNV+yWF N++aRe+qk+ RcHm_v2.0_Chr1g0381201 29 SSTRWIPTTDHIRILKELFYnKGVRSPTIEQVQRICLQLKWYGKIEFKNVYYWFVNQRAREKQKK 93 689**************98769*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MEPQNRHPTE DGRSNKVAGS SANMLRRKSS TRWIPTTDHI RILKELFYNK GVRSPTIEQV 60 QRICLQLKWY GKIEFKNVYY WFVNQRAREK QKKRSTSDVH VPMQRSGLVG NDNVTNWKHE 120 DQYINFGSSA PASASSAEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-27 | WOX family protein |