PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr1g0379361 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 91aa MW: 10500 Da PI: 7.5295 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 21.3 | 8.7e-07 | 57 | 88 | 2 | 33 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtf 33 fY +YA +GF vr+ +sk+s+ +e+++++f RcHm_v2.0_Chr1g0379361 57 FYTKYAPAAGFVVRIGSSKRSRAINEFIRKEF 88 9**********************999*99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
METNGIIVPT EMETEPIQAI PPSEENVSTS AFYPQIRNEL KPFKGQQFKT WEEAHVFYTK 60 YAPAAGFVVR IGSSKRSRAI NEFIRKEFFL Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 4e-08 | FAR1 family protein |