PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr1g0379201 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 101aa MW: 11729.4 Da PI: 9.5856 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 36.1 | 2.2e-11 | 46 | 86 | 2 | 42 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkre 42 fY +YA +GF vr+ +sk+s+ +e+++++f C+++g++ RcHm_v2.0_Chr1g0379201 46 FYTKYAPAAGFVVRIGSSKRSRAINEFIRKEFFCNRQGNSP 86 9*************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
METEPIQAIP PSEENVSTSA FYPQIRNELK PFKGQQFKTW EEAHVFYTKY APAAGFVVRI 60 GSSKRSRAIN EFIRKEFFCN RQGNSPIELT ENKLKLLMVW S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 4e-11 | FAR1 family protein |