PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0360381
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Dof
Protein Properties Length: 266aa    MW: 29153 Da    PI: 8.5659
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0360381genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1261.2e-391979262
                  zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                            ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkks+
  RcHm_v2.0_Chr1g0360381 19 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKST 79
                            6899******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MEENMGSEAR LASEKRARPQ EQLNCPRCNS TNTKFCYYNN YSLTQPRYFC KTCRRYWTEG  60
GTLRNVPVGG GSRKNKKSTS STASSSAISS SKNIIPDLNP PNLSHFSSQN PRMTHEGQDL  120
NLAFSANVEH YNGTSTAHYV DHHQVPKMES NNSSALELLR GTGIASRGVN SYIPNSIQDS  180
NAVLYSSSGF SLQEFKPSHL GFCVDGVGSR YGDHPQENGG NGRLLFPFGD LKQISSTTTG  240
HHELDQNKGQ GNPSGYWNGL MGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.43e-71Dof family protein