PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023928063.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 608aa MW: 66965.3 Da PI: 7.0741

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023928063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.7e-30	263	322	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg+Hnh+ XP_023928063.1 263 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCFNDMSILITTYEGKHNHP 322 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MENTTTSEEK SFLGNTIMEE RSMKSNGKEE STSMEINKEE RGKHTEEEEN SSMPFSANGN 60 SLRITKQVPL TMEKNTVDLL SRGKNQEDQL KLAEAKMGVV KEENERLKTL LERTVKEYQS 120 LQMQFFDILQ QENKSKDTVP SHQQAKEEPE LVSLSLGITS TEPKKEDKKN KIFSNGQEEE 180 KLNGALSLGL QDYIFEPSST EHVRNNSCSN NSFEEQKEEE PTEIWPPSKI LKTMKSGDEE 240 VSQQSQVKKT RVSVRARCDT PTMNDGCQWR KYGQKIAKGN PCPRAYYRCT VSPSCPVRKQ 300 VQRCFNDMSI LITTYEGKHN HPLPVSATAM ASTTSAAVSM LQSQSSTSLQ GGLNTSASVP 360 ISTSSNPHGF NFTLSQNPSP QQLYGLPNSS FSTLNSHPTI TLDLTTNAPS RLSSSFSSAP 420 RYPSTSLNFS SSFSPSLEPN NIFQTHWNNG PASYNNHGTV PAYNENPIGS LTSIERQPFQ 480 EQLYQPYMKE SIVAATKAIA SNPKFQSVLA AALTSYVGTS GGGVKENQGA YESSSMKLKW 540 GESHTMNPIY SSSQNGIGCG SSYLNKSSSF NSPKQGGLAL FPPNSLQLSA SNNCASAAPP 600 DNRDHFKL

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MENTTTSEEK SFLGNTIMEE RSMKSNGKEE STSMEINKEE RGKHTEEEEN SSMPFSANGN  60
SLRITKQVPL TMEKNTVDLL SRGKNQEDQL KLAEAKMGVV KEENERLKTL LERTVKEYQS  120
LQMQFFDILQ QENKSKDTVP SHQQAKEEPE LVSLSLGITS TEPKKEDKKN KIFSNGQEEE  180
KLNGALSLGL QDYIFEPSST EHVRNNSCSN NSFEEQKEEE PTEIWPPSKI LKTMKSGDEE  240
VSQQSQVKKT RVSVRARCDT PTMNDGCQWR KYGQKIAKGN PCPRAYYRCT VSPSCPVRKQ  300
VQRCFNDMSI LITTYEGKHN HPLPVSATAM ASTTSAAVSM LQSQSSTSLQ GGLNTSASVP  360
ISTSSNPHGF NFTLSQNPSP QQLYGLPNSS FSTLNSHPTI TLDLTTNAPS RLSSSFSSAP  420
RYPSTSLNFS SSFSPSLEPN NIFQTHWNNG PASYNNHGTV PAYNENPIGS LTSIERQPFQ  480
EQLYQPYMKE SIVAATKAIA SNPKFQSVLA AALTSYVGTS GGGVKENQGA YESSSMKLKW  540
GESHTMNPIY SSSQNGIGCG SSYLNKSSSF NSPKQGGLAL FPPNSLQLSA SNNCASAAPP  600
DNRDHFKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-67	WRKY family protein