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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023927263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 130aa MW: 14989.8 Da PI: 8.0409 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.6 | 3e-24 | 39 | 96 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK +k+ rsY++C ++C++kk+ e s+++p+ ++++Y+g Hnh XP_023927263.1 39 EDGYEWRKYGQKFIKNIGKMRSYFKCQRSSCSAKKRAEWSTSEPNNLKVVYKGVHNHA 96 7********************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MYVCMYNKDV LQVWREILEE GYTEEQDMDQ GGYRLVLPED GYEWRKYGQK FIKNIGKMRS 60 YFKCQRSSCS AKKRAEWSTS EPNNLKVVYK GVHNHALPAS ESGSSQLGTS SNANQYDLLT 120 QVFGDRSTAH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 9e-17 | WRKY family protein |