PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924553.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CPP

Protein Properties

Length: 612aa MW: 65207.2 Da PI: 7.4446

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.4	3.2e-14	124	163	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C N+ e+ XP_023924553.1 124 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCYNNVEN 163 89************************.******9875 PP
2	TCR	51	2.9e-16	208	247	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_023924553.1 208 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNFE 247 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MGEGEGSDFP PKKAQSDGPA ACSSTTEAPA AKKLARQLDF TAFDSSGSAT VVLPEHPQTQ 60 TVTVTVAVAA QSQPPQVLVS PVVATPPPST TTTQPLAQAP VRKPDSPKSR PKPNSEVKDG 120 TPKKQKQCNC KHSRCLKLYC ECFASGIYCD GCNCVNCYNN VENEAARREA VEATLERNPN 180 AFRPKIASSP HGVRDNREEA GEVLILGKHN KGCHCKKSGC LKKYCECFQA NILCSENCKC 240 IDCKNFEGSE ERQALFHGDQ GNNMAYIQQA ANAAITGAIG SSGYASPPIS KKRKSQELFF 300 TTAAKDPSAH RLGQFQQANH LKSSAPSSLS SIPGARVGGT AALGPSKFTY RSLLADIIQP 360 QDLKELCSVL VVLSGEAAQT IAEQRSATEK RTEDHTETSL ASSTQERFPS QKEPNVENAV 420 ADDCSSANQN DKIGAEDSSS DGADVPKGRP MSPGTLALMC DEQDAVFMAS ASPNGMMGNH 480 NTSSQLPYGQ GMTEVYAEQE KIVLTKLRDC LNRLITFGEI RETNCSSLAR SELGVQKDLL 540 SNVGANANAR IEAGNQQGPV SNGIAKTVLP PTANKTSQMA TPVVAAPSND LLPKVPFLPK 600 NGDTKLKNEK EM

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MGEGEGSDFP PKKAQSDGPA ACSSTTEAPA AKKLARQLDF TAFDSSGSAT VVLPEHPQTQ  60
TVTVTVAVAA QSQPPQVLVS PVVATPPPST TTTQPLAQAP VRKPDSPKSR PKPNSEVKDG  120
TPKKQKQCNC KHSRCLKLYC ECFASGIYCD GCNCVNCYNN VENEAARREA VEATLERNPN  180
AFRPKIASSP HGVRDNREEA GEVLILGKHN KGCHCKKSGC LKKYCECFQA NILCSENCKC  240
IDCKNFEGSE ERQALFHGDQ GNNMAYIQQA ANAAITGAIG SSGYASPPIS KKRKSQELFF  300
TTAAKDPSAH RLGQFQQANH LKSSAPSSLS SIPGARVGGT AALGPSKFTY RSLLADIIQP  360
QDLKELCSVL VVLSGEAAQT IAEQRSATEK RTEDHTETSL ASSTQERFPS QKEPNVENAV  420
ADDCSSANQN DKIGAEDSSS DGADVPKGRP MSPGTLALMC DEQDAVFMAS ASPNGMMGNH  480
NTSSQLPYGQ GMTEVYAEQE KIVLTKLRDC LNRLITFGEI RETNCSSLAR SELGVQKDLL  540
SNVGANANAR IEAGNQQGPV SNGIAKTVLP PTANKTSQMA TPVVAAPSND LLPKVPFLPK  600
NGDTKLKNEK EM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-177	CPP family protein