PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924400.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

DBB

Protein Properties

Length: 304aa MW: 32938.4 Da PI: 6.8643

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.4	1.3e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ e++ fC+ ++ lC+ C H+ H+ XP_023924400.1 4 QCDVCNKDEASVFCTADEAALCDACDHGVHHAnklaskHQ 43 7****99*****************974446666676 PP
2	zf-B_box	24.1	7.3e-08	56	92	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++C+ ++e ++ lfC++++ lC++C + +H Ht XP_023924400.1 56 PICDICQERQAFLFCQQDRAILCRECDFPIHTAneHT 92 79****99******************9546665 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MKIQCDVCNK DEASVFCTAD EAALCDACDH GVHHANKLAS KHQRFSLLHP SSKEFPICDI 60 CQERQAFLFC QQDRAILCRE CDFPIHTANE HTQKHNRFLL TGVKLSATSA QYTPSTAALS 120 KACDSVPDHH KSKPLIKNSV AAAAAAAPLA IPQPPILTKT TPTITTNNKS AGENFVADQT 180 SSISEYLIET LPGWHVEDFL DSTCAPFGFC KTGNGVLPFL DADLESNMGS FSSADMSFGV 240 WVPQAPVPAV CAPQMAAGQA GFKEIMKDGP NIKASKRWLD DGFTVPQISP SFTGSNKRSR 300 RTFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-78	DBB family protein