PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023923894.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 586aa MW: 65322.9 Da PI: 8.3225

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023923894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.1	3.7e-33	250	307	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_023923894.1 250 DDGYNWRKYGQKQVKGSENPRSYYKCTYPSCPTKKKVERSL-DGQITEIVYKGSHNHPK 307 8**************************************.*************85 PP
2	WRKY	104.1	7.8e-33	416	474	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts Cpv+k+ver+++d ++v++tYeg+Hnh+ XP_023923894.1 416 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSIACPVRKHVERASHDIRAVITTYEGKHNHD 474 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MASSASSLNN PINSHSNFSF SNQFMTSFTD LLSNNKNMDQ ENELRWGLSD LKSDRNGNEI 60 PKFKSLPPPS LPLSPPPLSP SSYLAFPTGL SPNEFLMSPL FGSNYNNLPS PTTGAFASQA 120 LNWMNNSGDN QQLGMKLEEK TFSDFSFQPQ TKPATTTSSS TFQSSSSMVS NSVEESLKRQ 180 EEAWNLKKPT NQNEFSLEKA VVKSEFAPIK NFTSDMVTSQ AKMQSGAAAL SGHNQCTQQS 240 QYIREQRKSD DGYNWRKYGQ KQVKGSENPR SYYKCTYPSC PTKKKVERSL DGQITEIVYK 300 GSHNHPKPQS NRRSNSQSIQ PSSCTNSGIS DQSIVTLGNR HMESVTMQDD SSVSIGEDDF 360 DQRSPMSNSG GDDDENEREA KRWKGENENG GFSASASRTV REPRVVVQTT SEIDILDDGY 420 RWRKYGQKVV KGNPNPRSYY KCTSIACPVR KHVERASHDI RAVITTYEGK HNHDVPAARG 480 NGSYAVNRAA TNNSSSNEAM PIRPSVMATH PIQTSYPNSF QNTRLTTSGI QAPFTLQMVQ 540 NQEGVPFSGY RNQNRDYMDQ TQLSEGVLSR AKEEWKTDSF LDSFLS

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MASSASSLNN PINSHSNFSF SNQFMTSFTD LLSNNKNMDQ ENELRWGLSD LKSDRNGNEI  60
PKFKSLPPPS LPLSPPPLSP SSYLAFPTGL SPNEFLMSPL FGSNYNNLPS PTTGAFASQA  120
LNWMNNSGDN QQLGMKLEEK TFSDFSFQPQ TKPATTTSSS TFQSSSSMVS NSVEESLKRQ  180
EEAWNLKKPT NQNEFSLEKA VVKSEFAPIK NFTSDMVTSQ AKMQSGAAAL SGHNQCTQQS  240
QYIREQRKSD DGYNWRKYGQ KQVKGSENPR SYYKCTYPSC PTKKKVERSL DGQITEIVYK  300
GSHNHPKPQS NRRSNSQSIQ PSSCTNSGIS DQSIVTLGNR HMESVTMQDD SSVSIGEDDF  360
DQRSPMSNSG GDDDENEREA KRWKGENENG GFSASASRTV REPRVVVQTT SEIDILDDGY  420
RWRKYGQKVV KGNPNPRSYY KCTSIACPVR KHVERASHDI RAVITTYEGK HNHDVPAARG  480
NGSYAVNRAA TNNSSSNEAM PIRPSVMATH PIQTSYPNSF QNTRLTTSGI QAPFTLQMVQ  540
NQEGVPFSGY RNQNRDYMDQ TQLSEGVLSR AKEEWKTDSF LDSFLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-121	WRKY family protein