PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023923587.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 497aa MW: 54493.4 Da PI: 7.9659

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023923587.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.4	6.9e-34	209	265	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgsefprsYY+Ct+ +Cpvkkkvers +++++ei+Y+g+Hnhe XP_023923587.1 209 NDGYNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKVERSL-EGQITEIIYKGQHNHE 265 8**************************************.*************7 PP
2	WRKY	106.3	1.6e-33	387	445	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gC+v+k+ver+++dpk+v++tYeg+Hnh+ XP_023923587.1 387 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSVGCNVRKHVERASTDPKAVITTYEGKHNHD 445 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MAKSEDSGRV TAPRPTITLP PGPSMETLFT GGPGASPGPM TLVSSFFSDN YPDSDCRSFS 60 QLLAGAMASP LATPTFFTHK DNSLKDNTSG FKQSRPNNLV VASSPLFTIP PGLSPSGFLN 120 SPGFFSPQVT AQAALVQSHM NMQAEYQPST LAASTESLTH NPSFTLSEAS QQQMAPSTSD 180 PRNSMMEQSE ASHSDRKYQP TIAVDKPTND GYNWRKYGQK QVKGSEFPRS YYKCTHLNCP 240 VKKKVERSLE GQITEIIYKG QHNHELPPPN KRAKEGSDLS GNTNSLAKPD LGSQNQAGNW 300 NKSSQAVPAY SVPERDQEST QTAPTQLTGS SDSEEEGDSE TREEGGGDEP NPKRRMTDAG 360 TSELPLSHKT VTEPKIIVQT RSEVDLLDDG YRWRKYGQKV VKGNPHPRSY YKCTSVGCNV 420 RKHVERASTD PKAVITTYEG KHNHDVPAAR NSSHNTVNRI APQKVVTEKH PLLKEMNFGS 480 NDQRPVLLQL KEEQITV

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MAKSEDSGRV TAPRPTITLP PGPSMETLFT GGPGASPGPM TLVSSFFSDN YPDSDCRSFS  60
QLLAGAMASP LATPTFFTHK DNSLKDNTSG FKQSRPNNLV VASSPLFTIP PGLSPSGFLN  120
SPGFFSPQVT AQAALVQSHM NMQAEYQPST LAASTESLTH NPSFTLSEAS QQQMAPSTSD  180
PRNSMMEQSE ASHSDRKYQP TIAVDKPTND GYNWRKYGQK QVKGSEFPRS YYKCTHLNCP  240
VKKKVERSLE GQITEIIYKG QHNHELPPPN KRAKEGSDLS GNTNSLAKPD LGSQNQAGNW  300
NKSSQAVPAY SVPERDQEST QTAPTQLTGS SDSEEEGDSE TREEGGGDEP NPKRRMTDAG  360
TSELPLSHKT VTEPKIIVQT RSEVDLLDDG YRWRKYGQKV VKGNPHPRSY YKCTSVGCNV  420
RKHVERASTD PKAVITTYEG KHNHDVPAAR NSSHNTVNRI APQKVVTEKH PLLKEMNFGS  480
NDQRPVLLQL KEEQITV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-137	WRKY family protein