PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923586.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 510aa    MW: 55877 Da    PI: 7.9745
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.47.2e-34222278259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vkgsefprsYY+Ct+ +Cpvkkkvers  +++++ei+Y+g+Hnhe
  XP_023923586.1 222 NDGYNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKVERSL-EGQITEIIYKGQHNHE 278
                     8****************************************.***************7 PP
2WRKY106.31.6e-33400458159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Cts gC+v+k+ver+++dpk+v++tYeg+Hnh+
  XP_023923586.1 400 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSVGCNVRKHVERASTDPKAVITTYEGKHNHD 458
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    
MAKSEDSGRV TAPRPTITLP PGPSMETLFT GGPGASPGPM TLVSSFFSDN YPDSDCRSFS  60
QLLAGAMASP LATPTFFTHK DNSLKDNTSG FKQSRPNNLV VASSPLFTIP PGLSPSGFLN  120
SPGFFSPQSP FGMSHQQALA QVTAQAALVQ SHMNMQAEYQ PSTLAASTES LTHNPSFTLS  180
EASQQQMAPS TSDPRNSMME QSEASHSDRK YQPTIAVDKP TNDGYNWRKY GQKQVKGSEF  240
PRSYYKCTHL NCPVKKKVER SLEGQITEII YKGQHNHELP PPNKRAKEGS DLSGNTNSLA  300
KPDLGSQNQA GNWNKSSQAV PAYSVPERDQ ESTQTAPTQL TGSSDSEEEG DSETREEGGG  360
DEPNPKRRMT DAGTSELPLS HKTVTEPKII VQTRSEVDLL DDGYRWRKYG QKVVKGNPHP  420
RSYYKCTSVG CNVRKHVERA STDPKAVITT YEGKHNHDVP AARNSSHNTV NRIAPQKVVT  480
EKHPLLKEMN FGSNDQRPVL LQLKEEQITV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-138WRKY family protein