PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923322.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 318aa    MW: 35780.5 Da    PI: 6.2851
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY772.2e-24134193258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     dDgy+WrKYGqK++ +++fpr+YYrCt++   gC ++k+v+r ++dp     tY g+H++
  XP_023923322.1 134 DDGYAWRKYGQKVILNAKFPRHYYRCTHKhdqGCLATKHVQRIHDDPPKYRSTYIGQHTC 193
                     8***************************99999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MECTWPESLP SSKKKAIKEL VQGRDFVNQL RSLLNKSAGD NNNNNNNKAA PAEDLVVKIL  60
NSFTNSLSIL NNAESDEVSQ IQANTHVTNW NGGPKSSESS EETSRNTTHK DRRGCYKRRK  120
TAQSWTKETP SLTDDGYAWR KYGQKVILNA KFPRHYYRCT HKHDQGCLAT KHVQRIHDDP  180
PKYRSTYIGQ HTCGNFLKVP ELFLNSSPPS DSSVLLSFDN STITNKQDSP FFTSFQSSIK  240
QEYKEEIPSD QNDIAHIQSS SSDYLISPDR TVAFESLGHM PVLSSTLDCD NGDVISGDMM  300
GSDDFSDDFL IDDFPLHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-41WRKY family protein