PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920729.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 676aa MW: 74513.6 Da PI: 6.318

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.9e-09	421	458	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + XP_023920729.1 421 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 458 664459******************************88 PP
2	BELL	127.3	5.7e-41	283	354	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k +kLls+ +eVd+rYkqy++q+q+v+ssF+++ag+g+akpYt+lAl++iSrhFrcL+dai++qi XP_023920729.1 283 EKQDLQNKLTKLLSMSDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAITGQI 354 6899*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MATFYTSSNN QRDSAPMLYL REHLPSSYAE APVIPGNMMM YMNSGPYSDA LALNSQQQNN 60 CMEIPSLGAS NSTPQQQEIL SNLGGSRIAE HDFNAWREAR NEMLVTHPMG GAASILHSGQ 120 NLQGQGLSLS LSTQMPSGIQ MSSIPYRNPN PGFASFLSPN SSISGDSGDR NGSSRDEQLR 180 NAEYLPPGFP GGNQDLNKGD SSPYGMPSIV RNVPNSKYLK VAQQLLDEVV NVRKALKQAD 240 MKNESTHEKN SKDGDGGSKN ENGVSSNPQE SAGNSLCELS HAEKQDLQNK LTKLLSMSDE 300 VDRRYKQYYH QMQIVVSSFD VIAGCGAAKP YTALALQTIS RHFRCLRDAI TGQIRATRKS 360 LGEQDTSGSS RGVGITRLRY VDQHLRQQRA LQQLGMMQQH AWRPQRGLPE SSVSILRAWL 420 FEHFLHPYPK DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE ETGDMEMDSN 480 SSSENAVKAT KGDNRTSEER GEDLQQSASS TATERSSTGQ LMDSKSNHVP DVEMAGSSVV 540 NFHNGSRGEA ENEYGLVKRR EEQRPNVDDC SLFPDAMMQS DAASERFMAA AYHMSELGRF 600 GSGSGVSLTL GLQHCEDGSL PMSSGNHHSF MSMRGDEIYS AAASSVGPET ADFECMNPGN 660 QQHRFSSSHL LHDFVV

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MATFYTSSNN QRDSAPMLYL REHLPSSYAE APVIPGNMMM YMNSGPYSDA LALNSQQQNN  60
CMEIPSLGAS NSTPQQQEIL SNLGGSRIAE HDFNAWREAR NEMLVTHPMG GAASILHSGQ  120
NLQGQGLSLS LSTQMPSGIQ MSSIPYRNPN PGFASFLSPN SSISGDSGDR NGSSRDEQLR  180
NAEYLPPGFP GGNQDLNKGD SSPYGMPSIV RNVPNSKYLK VAQQLLDEVV NVRKALKQAD  240
MKNESTHEKN SKDGDGGSKN ENGVSSNPQE SAGNSLCELS HAEKQDLQNK LTKLLSMSDE  300
VDRRYKQYYH QMQIVVSSFD VIAGCGAAKP YTALALQTIS RHFRCLRDAI TGQIRATRKS  360
LGEQDTSGSS RGVGITRLRY VDQHLRQQRA LQQLGMMQQH AWRPQRGLPE SSVSILRAWL  420
FEHFLHPYPK DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE ETGDMEMDSN  480
SSSENAVKAT KGDNRTSEER GEDLQQSASS TATERSSTGQ LMDSKSNHVP DVEMAGSSVV  540
NFHNGSRGEA ENEYGLVKRR EEQRPNVDDC SLFPDAMMQS DAASERFMAA AYHMSELGRF  600
GSGSGVSLTL GLQHCEDGSL PMSSGNHHSF MSMRGDEIYS AAASSVGPET ADFECMNPGN  660
QQHRFSSSHL LHDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-122	TALE family protein