PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920249.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 526aa MW: 57947.1 Da PI: 4.995

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.5e-30	253	312	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_023920249.1 253 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGNHNHP 312 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MEIDLSLNID AKEEEIEEEE KGGVDEEEEE EDEEKEQKNY QEHVHDAEEA AEATAGEVDD 60 DNDDYDASVV EVSLQQSMKT EELCVLQMKM NRMKEENKVL RKVVEQTMKE YCDLQMKFAA 120 IQQDNQIKDP QIFLSLPGNY GNASQEQKAV PKILDITNQP SSVAHKNGIG IRESELGLSL 180 RLHNTDAHED HEPVEIKDKE EGNNKLELAR FAPSVQNKQQ RPGDLGGFTG HVASPANRKA 240 RVSVRARCES ATMNDGCQWR KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCLEDMSI 300 LITTYEGNHN HPLPVGATAM ASTASPSASF VLVDSSSPSD GTSCVTQASL PYHMMNPSSH 360 HPSNIRSMIN PNDPSKGNIV LDLTNNPYEQ AHHQLIPMAS PSSYSSQPHL HQQGFNWMNG 420 KPSYHHNINI GDSLTNNNLF GSPSDKGWKA EEDKKSLAEN VTAIASDPKF RVAVAAAISS 480 LINKENHNST TQPMGTSFGP RDIGGSSSSA SNNWVLESLS GNGKPL

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MEIDLSLNID AKEEEIEEEE KGGVDEEEEE EDEEKEQKNY QEHVHDAEEA AEATAGEVDD  60
DNDDYDASVV EVSLQQSMKT EELCVLQMKM NRMKEENKVL RKVVEQTMKE YCDLQMKFAA  120
IQQDNQIKDP QIFLSLPGNY GNASQEQKAV PKILDITNQP SSVAHKNGIG IRESELGLSL  180
RLHNTDAHED HEPVEIKDKE EGNNKLELAR FAPSVQNKQQ RPGDLGGFTG HVASPANRKA  240
RVSVRARCES ATMNDGCQWR KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCLEDMSI  300
LITTYEGNHN HPLPVGATAM ASTASPSASF VLVDSSSPSD GTSCVTQASL PYHMMNPSSH  360
HPSNIRSMIN PNDPSKGNIV LDLTNNPYEQ AHHQLIPMAS PSSYSSQPHL HQQGFNWMNG  420
KPSYHHNINI GDSLTNNNLF GSPSDKGWKA EEDKKSLAEN VTAIASDPKF RVAVAAAISS  480
LINKENHNST TQPMGTSFGP RDIGGSSSSA SNNWVLESLS GNGKPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	5e-70	WRKY family protein