PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920248.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 526aa MW: 57988.2 Da PI: 5.0588

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.5e-30	253	312	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_023920248.1 253 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGNHNHP 312 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MEIDLSLNID AKEEEIEEEE KGGVDEEEEE EDEEKEQKNY QEHVHDAEEA AEATAGEVDD 60 DNDDYDASVV EVSLQQSMKT EELCVLQMKM NRMKEENKVL RKVVEQTMKE YCDLQMKFAA 120 IQQDNQIKDP QIFLSLPGNY GNASQEQKAV PKILDITNQP SSVSHKNGIG IRESELGLSL 180 RLHNTDAHED HEPVEIKDKE EANKKQELAR FAPSVQNKQQ RPGDLGGFTG HVASPANRKA 240 RVSVRARCEA ATMNDGCQWR KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCLEDMSI 300 LITTYEGNHN HPLPVGATAM ASTASPSASF VLVDSSSPSD GTSCVTQASL PCHMMNPSSH 360 HPSNIRSMIN PNDPSKGNIV LDLTNNPYEQ AHHQLIPMAS PSSYSSQPHL HQQGFNWMNG 420 KPSYHHSINI GNSLTNNNLF ASPSDKGWKA EEDKKSLAEN VTAIASDPKF RVAVAAAISS 480 LINKENHNST TQPMGTSFGP RDIGESSSSA SNNWVLESLS GNGKPL

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MEIDLSLNID AKEEEIEEEE KGGVDEEEEE EDEEKEQKNY QEHVHDAEEA AEATAGEVDD  60
DNDDYDASVV EVSLQQSMKT EELCVLQMKM NRMKEENKVL RKVVEQTMKE YCDLQMKFAA  120
IQQDNQIKDP QIFLSLPGNY GNASQEQKAV PKILDITNQP SSVSHKNGIG IRESELGLSL  180
RLHNTDAHED HEPVEIKDKE EANKKQELAR FAPSVQNKQQ RPGDLGGFTG HVASPANRKA  240
RVSVRARCEA ATMNDGCQWR KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCLEDMSI  300
LITTYEGNHN HPLPVGATAM ASTASPSASF VLVDSSSPSD GTSCVTQASL PCHMMNPSSH  360
HPSNIRSMIN PNDPSKGNIV LDLTNNPYEQ AHHQLIPMAS PSSYSSQPHL HQQGFNWMNG  420
KPSYHHSINI GNSLTNNNLF ASPSDKGWKA EEDKKSLAEN VTAIASDPKF RVAVAAAISS  480
LINKENHNST TQPMGTSFGP RDIGESSSSA SNNWVLESLS GNGKPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	1e-70	WRKY family protein