PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918501.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 340aa    MW: 37553.4 Da    PI: 10.0474
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.6e-31269326359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeHnh 
  XP_023918501.1 269 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHA 326
                     99************************988****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MAVEFMMDYR NNNFSAKMEE NAVQEAASGL ESVEKLIRLL SQSQQQQQQQ QQQQQYQIQS  60
QNQSSSEMER DCKAVADVAV SKFKKVISLL GRTRTGHARF RRGPLGPPPP PPQPLVSNQS  120
QERSAPEPRV YHATPIQQIP PLPQYHGETF MPKNGVIERK DSSTTTINFS YSSAATSFMS  180
SLTGDTDSKQ QPSSSSAFQI TNLSQVSSVG KPPLSTASLK RKCSSENLGS GKCGGSSGRC  240
HCSKKRKLRL KRVVRVPAIS LKMADIPPDD YSWRKYGQKP IKGSPHPRGY YKCSSVRGCP  300
ARKHVERALD DPAMLVVTYE GEHNHALSVA EASNLILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.19e-70WRKY family protein