PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918500.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 341aa    MW: 37640.5 Da    PI: 10.0474
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.6e-31270327359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeHnh 
  XP_023918500.1 270 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHA 327
                     99************************988****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MAVEFMMDYR NNNFSAKMEE NAVQEAASGL ESVEKLIRLL SQSQQQQQQQ QQQQQYQIQS  60
QNQSSSEMER DCKAVADVAV SKFKKVISLL GRTRTGHARF RRGPLGPPPP PPQPLVSNQS  120
QERSAPEPRV YHATPIQQIP PLPQYHGETF MPKNGVIERK DSSTTTINFS YSSAATSFMS  180
SLTGDTDSKQ QPSSSSAFQI TNLSQVSSVG KPPLSTASLK RKCSSENLGS GKCGGSSGRC  240
HCSKKSRKLR LKRVVRVPAI SLKMADIPPD DYSWRKYGQK PIKGSPHPRG YYKCSSVRGC  300
PARKHVERAL DDPAMLVVTY EGEHNHALSV AEASNLILES S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-69WRKY family protein