PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023916985.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 421aa MW: 46164.9 Da PI: 6.6303

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023916985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.5	2.7e-28	113	170	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkg+ef rsYY+Ct+++C vkk++er++ +++++ tY g+H h+k XP_023916985.1 113 EDGYNWRKYGQKLVKGNEFIRSYYKCTHSRCLVKKQLERTH-GGQIIDATYFGQHVHPK 170 8*************************************9.*************85 PP
2	WRKY	107.2	8.2e-34	287	345	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+vkg+++prsYYrC+ +gCpvkk+ver+++dpkvv++tYeg+H+h+ XP_023916985.1 287 VNDGYRWRKYGQKMVKGNPNPRSYYRCSNSGCPVKKHVERASHDPKVVITTYEGQHDHD 345 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MISSGECAPD ERASDKMRHR QSSDGGIALD QIPDDGLQAK QSDQEASTPS SIPEKASQAP 60 DAAVQTSRSD QEQSPSSIIS EKGSQARDPS NLASQSGQEG STPSVIREKV VTEDGYNWRK 120 YGQKLVKGNE FIRSYYKCTH SRCLVKKQLE RTHGGQIIDA TYFGQHVHPK PEIIVPGSVG 180 LALSVVDEKP NEPSSIGATD KSLVEYGQTP HQMKPVDASS SRGSIVAVSD DVKGALSQTS 240 RIRNEVVDDD LDSKRRKKEE CNVAVLVEKP SGEHRSVVQT LSEVDIVNDG YRWRKYGQKM 300 VKGNPNPRSY YRCSNSGCPV KKHVERASHD PKVVITTYEG QHDHDMPPAR IVTHNTAGSN 360 VHTTAHNGEA GTKSEEVDAV CTEDEELKDK RTRTKSEMNG KPGIETNINE RQTPNPEPVQ 420 S

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MISSGECAPD ERASDKMRHR QSSDGGIALD QIPDDGLQAK QSDQEASTPS SIPEKASQAP  60
DAAVQTSRSD QEQSPSSIIS EKGSQARDPS NLASQSGQEG STPSVIREKV VTEDGYNWRK  120
YGQKLVKGNE FIRSYYKCTH SRCLVKKQLE RTHGGQIIDA TYFGQHVHPK PEIIVPGSVG  180
LALSVVDEKP NEPSSIGATD KSLVEYGQTP HQMKPVDASS SRGSIVAVSD DVKGALSQTS  240
RIRNEVVDDD LDSKRRKKEE CNVAVLVEKP SGEHRSVVQT LSEVDIVNDG YRWRKYGQKM  300
VKGNPNPRSY YRCSNSGCPV KKHVERASHD PKVVITTYEG QHDHDMPPAR IVTHNTAGSN  360
VHTTAHNGEA GTKSEEVDAV CTEDEELKDK RTRTKSEMNG KPGIETNINE RQTPNPEPVQ  420
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	7e-93	WRKY family protein