PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915487.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

DBB

Protein Properties

Length: 296aa MW: 32770.7 Da PI: 7.0448

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915487.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.8	8.1e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C ++++ + fC ++ lC+ C ++H+ Ht+ XP_023915487.1 4 QCGVCDKEGAAVFCPADEAALCDGCDHSIHHAnklaskHTR 44 7****************************744477777875 PP
2	zf-B_box	29.8	1.2e-09	56	92	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e +++lfC++++ lC++C l +Hk Ht XP_023915487.1 56 PLCDICQERRAILFCKEDRAILCRECDLPIHKAteHT 92 78*****************************887865 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MKIQCGVCDK EGAAVFCPAD EAALCDGCDH SIHHANKLAS KHTRFSLVHP SSKEFPLCDI 60 CQERRAILFC KEDRAILCRE CDLPIHKATE HTQIHNRFLF TGVKLSASSS LYPTSSSSTA 120 SDANIGTENR STKSSIKIPK PIHNEALSSP SSAKTTPPTI KINENENNTV SISTSSISEY 180 LMETLPGWGV EDFLDSSSAN YNGFCKSYGD FLPFEDQDLG RNISSFPSEE GLANWVPQVS 240 PQSSQFPCLP HTEFLNPFKE SEKTTNVKRT SRKWSTDAFT VPQISSPCLK KSRHFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	8e-63	DBB family protein