PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912628.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 517aa    MW: 56468.5 Da    PI: 4.9901
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.87e-26210266259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vk+ + +rsYY+Ct+++C++kk +e+s++ ++v+ei+Y+++H h+
  XP_023912628.1 210 SDGYNWRKYGQKQVKSPKGSRSYYKCTFSDCSAKK-IECSDHSGRVIEIVYKSQHSHD 266
                     7********************************98.*********************7 PP
2WRKY97.58.9e-31380436359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ ++ ++v+itY+g H+h+
  XP_023912628.1 380 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNASAVIITYKGVHDHD 436
                     9*******************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MAGNESFEAL RVENSKSHEV VVVEEEEEEE EYEEDPEEEE VEESEEEEDE EDEREEEPLS  60
ELQSSAPLGE PKLGDSHFET LAPSSSSLQS SLNDHCAVLA VNSTSQSLGR AEVQDQVGVS  120
PQEALASATA QLVDAQTQNQ FQVAVCPTSP SELSPTSVTQ SISSLPSPTL LEQRLSPVKV  180
NDECTPKSDL QVSSDLKPMS SVPVVKTPSS DGYNWRKYGQ KQVKSPKGSR SYYKCTFSDC  240
SAKKIECSDH SGRVIEIVYK SQHSHDPPRK SNCTKENKLA SSTELVVANS VTEHPIQMLN  300
KSEPPTASKE TPLISERKRQ NSSDSNGNCE TKIKEEHVNE PEPKRRVKKS NLANSGSIIK  360
PGKKPKFVVH AAGDVGISGD GYRWRKYGQK MVKGNPHPRN YYRCTSAGCP VRKHIETAVD  420
NASAVIITYK GVHDHDMPVP KKRHGPPSAP LVAAAAPASM NNLQSKKTDA LQNQASSTQW  480
SVDTEGELTG EAMELGGEKA IESARTLLSI GFEIKPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-124WRKY family protein