PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911839.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C3H
Protein Properties Length: 402aa    MW: 44261.4 Da    PI: 9.1983
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.52e-07216235221
                     -S---SGGGGTS--TTTTT- CS
         zf-CCCH   2 ktelCrffartGtCkyGdrC 21 
                     k ++C+ f+rtG+C +G+ C
  XP_023911839.1 216 KVAICKEFLRTGHCAHGSHC 235
                     899***************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MDEQAKLQYR IAQLEAQVDR AKREKARLQS PQRGPFVRQR GGRWAPYGQP HRNLSLVVTD  60
ASPLVATTKP TPRVSAPSAP DLDMSKSNGT KREKTRLEEV RKTQVKGEHQ ANQDAAAAHS  120
RGSSGQSARL MELDGIRYRV SDDGSKLTRE HGTSSSSCNL RRQSNRQLNG IDNIDDKETP  180
KKVIIAGVKF LRTKHGNLLR AASTPKAARF AHDHEKVAIC KEFLRTGHCA HGSHCDLSHQ  240
LSYHRVSACT HFLRGNCTND ACRYPHVSVS PTAQVCRAFA TLGYCSKGPT CDKRHVVECP  300
DFANTGRCVD HERGKCKLPH VERANTLRKA AKRQAKQGLD EESDLSSDEE PESQSRAASD  360
SDGIESDIEV MLDDLLTSGH GGAGSQSQAH AFAAQQDYVR IS