PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911043.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 334aa    MW: 37653.9 Da    PI: 10.3137
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-30267324359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YYrC+   gCp++k+vers edp+++++tYe eHnh+
  XP_023911043.1 267 DDYSWRKYGQKPIKGSPHPRGYYRCSNMkGCPARKHVERSLEDPSMLIVTYECEHNHS 324
                     99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEGVEKTNNA AVEKCHRFLN LLCQPNDRTQ RKSLMVQTEE VVLMFRRVVS VLDSGLEHRR  60
VRKSKMFETS LPQHIFLESP HNRTIISPKP PQVLPTNRSE NPIQEMDSKS RNSLHPSQNK  120
VPPNISKPKP SQSVQLPQQQ IQIVHFQPPQ RNFQTDKYSR SNSGTCLTFD GSTQEPTMSS  180
TRFIPSLSIG GGDANSSDNS FYIIGMPQLP NQIPKDSRPR CSGRVEGGSV KCGSIATCHC  240
SKKRQPRLRK TIKVPAISSK VADIPGDDYS WRKYGQKPIK GSPHPRGYYR CSNMKGCPAR  300
KHVERSLEDP SMLIVTYECE HNHSRLLSSQ SAHT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15965RRVRKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.12e-93WRKY family protein