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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023911042.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 334aa MW: 37653.9 Da PI: 10.3137 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.2 | 1.1e-30 | 267 | 324 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YYrC+ gCp++k+vers edp+++++tYe eHnh+ XP_023911042.1 267 DDYSWRKYGQKPIKGSPHPRGYYRCSNMkGCPARKHVERSLEDPSMLIVTYECEHNHS 324 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MEGVEKTNNA AVEKCHRFLN LLCQPNDRTQ RKSLMVQTEE VVLMFRRVVS VLDSGLEHRR 60 VRKSKMFETS LPQHIFLESP HNRTIISPKP PQVLPTNRSE NPIQEMDSKS RNSLHPSQNK 120 VPPNISKPKP SQSVQLPQQQ IQIVHFQPPQ RNFQTDKYSR SNSGTCLTFD GSTQEPTMSS 180 TRFIPSLSIG GGDANSSDNS FYIIGMPQLP NQIPKDSRPR CSGRVEGGSV KCGSIATCHC 240 SKKRQPRLRK TIKVPAISSK VADIPGDDYS WRKYGQKPIK GSPHPRGYYR CSNMKGCPAR 300 KHVERSLEDP SMLIVTYECE HNHSRLLSSQ SAHT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 59 | 65 | RRVRKSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04670.1 | 2e-93 | WRKY family protein |