PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910552.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 349aa    MW: 37819.2 Da    PI: 9.8809
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.91.6e-31277334359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYeg+Hnh+
  XP_023910552.1 277 DEYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYEGDHNHS 334
                     9*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MVNGVWEIMA VELMMGYGGD SFAGKSSEEN ALAVKEAASA GIQSVEKLMR LISQEQASME  60
VGAVADVAVD KFKRVISLLD RKRLGHARFR RAPAGASPQQ KQENQEVQEP GPSNIPIPHR  120
QKLEPVSAFK VYCPTPTPIS RLPPLPNSHT HVHQQPLGLM VAKAGSLERK DGANSISFCS  180
SPPISAGNSF VSSLTGDTES LQPSLSSGFQ ITNLSQVSSV GKPPLSLKRR CSSMDDGALK  240
CGSSSGRCHC SKKRKSKIKR VIRVPAVSPK MADIPPDEYS WRKYGQKPIK GSPHPRGYYK  300
CSSLRGCPAR KHVERALDDP TMLIVTYEGD HNHSHTITEA NTALVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-93WRKY family protein