PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023909383.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CPP

Protein Properties

Length: 792aa MW: 86420.5 Da PI: 5.8523

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023909383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.3	2.3e-16	497	535	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_023909383.1 497 ACKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 535 589**********************************96 PP
2	TCR	50.6	3.8e-16	582	620	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs C+Ce+CkN XP_023909383.1 582 RHKRGCNCKKSNCLKKYCECYQGGVGCSIGCRCEGCKNA 620 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
MDTPERNQIG TPISKFEDSP VFNYINSLSP IKPVKSTHIT QTFNPLNFSS LPSVFTSPHV 60 NSHKESRLKR HNFSDPSKPE FSSENGNKVC TNEGIGVDAT QLYDNSAELQ DNFDSRVSDG 120 EASVEPSSEH SKFAIELPRT LKYDCGSPVC DPTPCCGTEA GCMPTSLVQC GQEASAKGSS 180 EGEVHLSEMC RTDQTKEGLE CDWESLISDC PDILIFNSPN DSEAFKGIIQ KSVEPLTRFC 240 SSLMSQLPLN EFNDVHKMQI VDPVDSGELE TEDLSAKPGE ASELEEIDQL QSNPADTVLY 300 KGMSSNASEK LDNEVGMYMP DGSKAVTILH RGMRRRCLDF EMVGARRKNL GDGSNSSSSM 360 LSQSDENIAC HDKQLVPFKP GGDSSRCILP GIGLHLNALA TTSKDYKNVK HEDLSSGRQS 420 YLPSSTASLH SPSNSQEPFL QSLATASSER ETDHGENGAA PVEDASQASA YQVSDDFNQN 480 SPKKKRRRLE HAGESDACKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQD CFNKPIHEDT 540 VLATRKQIES RNPLAFAPKV IRNSDSVTEI GDESSKTPAS ARHKRGCNCK KSNCLKKYCE 600 CYQGGVGCSI GCRCEGCKNA FGRKDGSAPI GTEAELEEET EACENSAVDK VLQKPEIQNN 660 EEQHPACALP MTPLRISRPM VPLPFSSNVK LSRASFITVG SSSGLYTSQK LGKPSILRSV 720 PKFEKHFQTV PEDEMPEILR GNCTPSTGVK SSSPNSKRVS PPQSDFGASP SRRSGRKLIL 780 QSIPSFPSLT QH

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

MDTPERNQIG TPISKFEDSP VFNYINSLSP IKPVKSTHIT QTFNPLNFSS LPSVFTSPHV  60
NSHKESRLKR HNFSDPSKPE FSSENGNKVC TNEGIGVDAT QLYDNSAELQ DNFDSRVSDG  120
EASVEPSSEH SKFAIELPRT LKYDCGSPVC DPTPCCGTEA GCMPTSLVQC GQEASAKGSS  180
EGEVHLSEMC RTDQTKEGLE CDWESLISDC PDILIFNSPN DSEAFKGIIQ KSVEPLTRFC  240
SSLMSQLPLN EFNDVHKMQI VDPVDSGELE TEDLSAKPGE ASELEEIDQL QSNPADTVLY  300
KGMSSNASEK LDNEVGMYMP DGSKAVTILH RGMRRRCLDF EMVGARRKNL GDGSNSSSSM  360
LSQSDENIAC HDKQLVPFKP GGDSSRCILP GIGLHLNALA TTSKDYKNVK HEDLSSGRQS  420
YLPSSTASLH SPSNSQEPFL QSLATASSER ETDHGENGAA PVEDASQASA YQVSDDFNQN  480
SPKKKRRRLE HAGESDACKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQD CFNKPIHEDT  540
VLATRKQIES RNPLAFAPKV IRNSDSVTEI GDESSKTPAS ARHKRGCNCK KSNCLKKYCE  600
CYQGGVGCSI GCRCEGCKNA FGRKDGSAPI GTEAELEEET EACENSAVDK VLQKPEIQNN  660
EEQHPACALP MTPLRISRPM VPLPFSSNVK LSRASFITVG SSSGLYTSQK LGKPSILRSV  720
PKFEKHFQTV PEDEMPEILR GNCTPSTGVK SSSPNSKRVS PPQSDFGASP SRRSGRKLIL  780
QSIPSFPSLT QH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	489	PKKKRRRL
2	483	488	KKKRRR
3	485	489	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-168	CPP family protein