PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908211.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 159aa    MW: 18153.7 Da    PI: 4.9666
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY80.22.2e-25102156159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYG+K+vk+s++pr    C+  gCpvkk+ver+++dp++v++tYeg Hnhe
  XP_023908211.1 102 LDDGFKWRKYGKKMVKNSPNPR----CSIDGCPVKKRVERDRDDPRYVITTYEGVHNHE 156
                     59*******************6....********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MSNNNFKPPA DLPESREYVD QSNFEFSEYL TFDDWLDEED PTSNASGSTH QNPVHQANEV  60
SVFGGSESHV EGSSSREGGS GRERREVKER FAFKTISEVE ILDDGFKWRK YGKKMVKNSP  120
NPRCSIDGCP VKKRVERDRD DPRYVITTYE GVHNHESSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.11e-38WRKY family protein