PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023908210.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 163aa MW: 18750.3 Da PI: 5.1351

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023908210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.5	4.9e-32	102	160	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YYrC+ gCpvkk+ver+++dp++v++tYeg Hnhe XP_023908210.1 102 LDDGFKWRKYGKKMVKNSPNPRNYYRCSIDGCPVKKRVERDRDDPRYVITTYEGVHNHE 160 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MSNNNFKPPA DLPESREYVD QSNFEFSEYL TFDDWLDEED PTSNASGSTH QNPVHQANEV 60 SVFGGSESHV EGSSSREGGS GRERREVKER FAFKTISEVE ILDDGFKWRK YGKKMVKNSP 120 NPRNYYRCSI DGCPVKKRVE RDRDDPRYVI TTYEGVHNHE SSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	8e-44	WRKY family protein