PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023908144.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 314aa MW: 35472.6 Da PI: 5.0233

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023908144.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.6	1e-08	257	291	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+ +gL+++q+ +WF N+R ++ XP_023908144.1 257 KWPYPTEADKVSLADLTGLDQKQINNWFINQRKRH 291 679*****************************885 PP
2	ELK	37.7	4.2e-13	211	232	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ LlrKYsgy++sLk+EFs XP_023908144.1 211 ELKDKLLRKYSGYISSLKHEFS 232 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MDNYLVNNNY TNNYQSFQTP VAGLADRMQV FGPDRLLSGS SSSAVSDATS MVAEIQRGGG 60 GRTSSDEEAS GAIRAKISSH PLYPKLLQAY IDCQKVGAPP EIADVLDEIQ RESDLCKRTV 120 AVSTRFGSDP ELDQFMETYC DILSKYKSDL KRPFDEATSF LNNIETQLNT LCNNGASRTC 180 VSDEVDGSSD EDVSGGEIEA LECQRSNEDR ELKDKLLRKY SGYISSLKHE FSKKKKKGKL 240 PKEARQILLE WWNVHYKWPY PTEADKVSLA DLTGLDQKQI NNWFINQRKR HWKPSENMQF 300 AVMDSLYGPI FMND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-102	TALE family protein