PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023905918.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 286aa MW: 31871.2 Da PI: 7.5245

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023905918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.8	1e-19	29	89	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t++q+++L++l+++ r psae++++++++l +++ ++V++WFqN++a+e++ XP_023905918.1 29 TRWTPTTDQIRILKDLYYNngVRSPSAEQIQRISARLrkygKIEGKNVFYWFQNHKARERQ 89 6***************8678***********************************97 PP
2	Wus_type_Homeobox	112.9	1.6e-36	28	91	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_023905918.1 28 ITRWTPTTDQIRILKDLYYnNGVRSPSAEQIQRISARLRKYGKIEGKNVFYWFQNHKARERQKK 91 58*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MEPQNQQQQA LNEDGGSGKG GYLCRPSITR WTPTTDQIRI LKDLYYNNGV RSPSAEQIQR 60 ISARLRKYGK IEGKNVFYWF QNHKARERQK KRLISDVPMQ RGVGVGNTNW NSKPEESIHT 120 KYPLPNITSG VSASSSSSGV ISVGHMGNYG YRSVTMEKSF RDCSISNGGN NGGVGGSIGH 180 NSGCVGVDSY SSSYSTLFDK RRLMEENLGV QEEEEEEVEA GEKETLPLFP MHAEDINGFC 240 NTNPYTTNGH YMYTSCYRSV DDGINASRTS LELSLNSYCH RSSPYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-37	WOX family protein