PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023903746.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 372aa MW: 42539.4 Da PI: 6.454

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023903746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	300	334	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_023903746.1 300 KWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 334 669*****************************885 PP
2	ELK	37.9	3.9e-13	254	275	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_023903746.1 254 ELKNHLLRKYSGYLSSLKQELS 275 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEDYNNQLNE NSAPRGNFLY ASPVLAANSS GYGRTSSGSN VGTQMHINTF PLQSGGDCTF 60 QSETHPIVKT EASTSQHVQK FHYPLMRGHQ VQHPQQQQQQ QGNENSSEVE AIKAKIIAHP 120 QYSNLLEAYM DCQKVGAPPE VVARLSAARQ EFEARQRSSG SARDTSKDPE LDQFMEAYYD 180 MLVKYREELT RPIQEAMDFM RRIESQLNML GNGPVRVFSS DEKCEGVGSS EEDQDNSAGE 240 TELPEIDPRA EDRELKNHLL RKYSGYLSSL KQELSKKKKK GKLPKDARQK LLSWWELHYK 300 WPYPSETEKV ALAESTGLDQ KQINNWFINQ RKRHWKPSED MQFMVMDGLH PQNATLYMDG 360 HYMADGHYRL GP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEDYNNQLNE NSAPRGNFLY ASPVLAANSS GYGRTSSGSN VGTQMHINTF PLQSGGDCTF  60
QSETHPIVKT EASTSQHVQK FHYPLMRGHQ VQHPQQQQQQ QGNENSSEVE AIKAKIIAHP  120
QYSNLLEAYM DCQKVGAPPE VVARLSAARQ EFEARQRSSG SARDTSKDPE LDQFMEAYYD  180
MLVKYREELT RPIQEAMDFM RRIESQLNML GNGPVRVFSS DEKCEGVGSS EEDQDNSAGE  240
TELPEIDPRA EDRELKNHLL RKYSGYLSSL KQELSKKKKK GKLPKDARQK LLSWWELHYK  300
WPYPSETEKV ALAESTGLDQ KQINNWFINQ RKRHWKPSED MQFMVMDGLH PQNATLYMDG  360
HYMADGHYRL GP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-144	TALE family protein