PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901400.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 416aa MW: 45338.4 Da PI: 7.0603

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88	8.8e-28	142	196	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ XP_023901400.1 142 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 196 5689***************.******************************86 PP
2	Myb_DNA-binding	39.6	1.2e-12	145	194	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ XP_023901400.1 145 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 194 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MLAVSPLRNT KDENLGETES YSIGASDFPD FSDGNLLDSI DFDDLFVGEM LPDLEMDPEI 60 LAEFSVSGGE ESANTKKEEE DKVSGSGSGS GSGFNSSSSR GEEIVSKRDE SVVVNLRPPK 120 QTDHHKGRKS STQSKNSQGK RKVKVDWTPE LHRRFVQAVE QLGVDKAVPS RILELMGIDC 180 LTRHNIASHL QKYRSHRKHL LAREAEAASW SQRRQMYGTA SGGGGGGGGK REMSPWLAPT 240 MGFPPITPMH HFRPLHVWGH PSMDQSLMPM WPKHLAHSPP PLPPPPTTWV PAPTPLPPDP 300 LYWHPHHQRV PNALTPGTPC FPQPLPTTRF ASPPVPGIPP HTLYKVDPGI GVPPGQSGPH 360 PMLDFHPTKE SVDAAIGDVL SKPWLPLPLG LKPPSTDSVM GELQRQGVPK VPPSCA

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MLAVSPLRNT KDENLGETES YSIGASDFPD FSDGNLLDSI DFDDLFVGEM LPDLEMDPEI  60
LAEFSVSGGE ESANTKKEEE DKVSGSGSGS GSGFNSSSSR GEEIVSKRDE SVVVNLRPPK  120
QTDHHKGRKS STQSKNSQGK RKVKVDWTPE LHRRFVQAVE QLGVDKAVPS RILELMGIDC  180
LTRHNIASHL QKYRSHRKHL LAREAEAASW SQRRQMYGTA SGGGGGGGGK REMSPWLAPT  240
MGFPPITPMH HFRPLHVWGH PSMDQSLMPM WPKHLAHSPP PLPPPPTTWV PAPTPLPPDP  300
LYWHPHHQRV PNALTPGTPC FPQPLPTTRF ASPPVPGIPP HTLYKVDPGI GVPPGQSGPH  360
PMLDFHPTKE SVDAAIGDVL SKPWLPLPLG LKPPSTDSVM GELQRQGVPK VPPSCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	7e-94	G2-like family protein