PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023899975.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 364aa MW: 40284.6 Da PI: 6.1838

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023899975.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.3	8.6e-30	130	191	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+rs+edp+v+eitY+g+H++ XP_023899975.1 130 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDEDPNVFEITYRGRHTCA 191 59*************************98999************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MDNMGDWEQK NLISELAQGL ELARQLQIHL NVPSSSHEAR EFLVEKILSS YEKALSMLNL 60 SSSVSEPQAI GGAIRMSESP PSLTGSPRSE DSDRELKDQE QRDASRKRKT LPRWTRQVRV 120 NPGVGLEGPL DDGFSWRKYG QKDILGAKYP RGYYRCTHRN VQGCLATKQV QRSDEDPNVF 180 EITYRGRHTC AQASATHTVP APASPEKHEP INSVNPAQLL SHQPQQTQQL SQEMLLNFRE 240 ALKVQTENLD TAHHYQQPFP SFGFPAAAST SSVKVENQVF PDSLIDNNFV GSISPSFMSP 300 ATSGTNYFTV SPTGVNSFGS VHQNLQTSES AATSTKNSPT AALDFPFDQD FDPNFTFGSS 360 GFFP

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MDNMGDWEQK NLISELAQGL ELARQLQIHL NVPSSSHEAR EFLVEKILSS YEKALSMLNL  60
SSSVSEPQAI GGAIRMSESP PSLTGSPRSE DSDRELKDQE QRDASRKRKT LPRWTRQVRV  120
NPGVGLEGPL DDGFSWRKYG QKDILGAKYP RGYYRCTHRN VQGCLATKQV QRSDEDPNVF  180
EITYRGRHTC AQASATHTVP APASPEKHEP INSVNPAQLL SHQPQQTQQL SQEMLLNFRE  240
ALKVQTENLD TAHHYQQPFP SFGFPAAAST SSVKVENQVF PDSLIDNNFV GSISPSFMSP  300
ATSGTNYFTV SPTGVNSFGS VHQNLQTSES AATSTKNSPT AALDFPFDQD FDPNFTFGSS  360
GFFP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	110	SRKRKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	4e-63	WRKY family protein