PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899819.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 344aa    MW: 38683.9 Da    PI: 5.0182
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.22e-29122183159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+r++edp+++e+tY+g+H+++
  XP_023899819.1 122 LDDGYSWRKYGQKDILGANFPRGYYRCTHRhsqGCLATKQVQRCDEDPTIFEVTYRGRHTCS 183
                     59***************************98999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MAMEWEQKTL ISELNQGKEL AKQLMNHLNP SSSHETREFL IEKILSSYEK ALSMINWGAC  60
VEEPKSAINN LESPSSFAIT SPRSEGYDQD SKHKDVYKKR KTLPRWTEQV KVCSGTGLEG  120
PLDDGYSWRK YGQKDILGAN FPRGYYRCTH RHSQGCLATK QVQRCDEDPT IFEVTYRGRH  180
TCSQASHLNV ASASVKENKR KFQPQQQSQE IVFNYGGGLK SEDMETREDD IFPSFSFPST  240
PIGSDNADNN IFSESIMLEN NFMGSFSPTF ISPATSESNL FSLSPCHMNS YGLGHNVQTS  300
ESDLTDIISA PTSVTNSPIG NLDFSLEKVD IDPNFPFDNP EFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.15e-56WRKY family protein