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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023898193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 185aa MW: 21045.8 Da PI: 7.9522 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.5 | 6.6e-29 | 108 | 169 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g++++rsYYrCt++ gC ++k+v+rs+edp+v+ itY+g+H++ XP_023898193.1 108 LDDGYSWRKYGQKDILGANYTRSYYRCTFRhsqGCLATKQVQRSDEDPTVFAITYRGRHTCA 169 59**************************988889*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MELAKLLEIH PNLSSSSHET REFLAEMILG LYTKAISMLN LSSSVDETQF IGSAIRMFES 60 LADGLRSEDS DRELKNQSTE MCIDKEKQLP KWTVQVRVSS EMGLESPLDD GYSWRKYGQK 120 DILGANYTRS YYRCTFRHSQ GCLATKQVQR SDEDPTVFAI TYRGRHTCAY VPSASKTKPV 180 RRSAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 3e-47 | WRKY family protein |