PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023898192.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 340aa MW: 38931.3 Da PI: 8.7059

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023898192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.2	1.9e-29	105	166	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ gs +pr+YYrCt++ gC ++k+v+rs+edp v+++tY+g+H+++ XP_023898192.1 105 LDDGYSWRKYGQKDILGSSYPRGYYRCTHRyvqGCLARKHVQRSDEDPAVFVVTYQGRHTCT 166 59*************************9999*************************97 PP
2	WRKY	24.8	4.5e-08	288	307	3	22
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 Dg +WrKYGqK++ g+++pr XP_023898192.1 288 DGMSWRKYGQKNILGANYPR 307 9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MKLAKQRQIH LNAPSSSHET SEFLGENFLA SYEKAYSMLN LSSSKGEPQP LRRSTGMSES 60 PPSLAGSPRS EDSRELEDYI RILFSLPRWT EQVRVTTGLG IERPLDDGYS WRKYGQKDIL 120 GSSYPRGYYR CTHRYVQGCL ARKHVQRSDE DPAVFVVTYQ GRHTCTQALA SSTPFPSLPE 180 RLGMELTKQL EIHPNLSSSS HETYEFLAEM ILGLYTKAIS MLNLSSSVDE TQLIEGAIRM 240 FKSLADGLRS EDSDRELKDQ KHRDVYRERC LLLVPISFGM GCERLPYDGM SWRKYGQKNI 300 LGANYPRYRT LFLKSILINT FVNKFTIRNF GNMLLCLVFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	1e-43	WRKY family protein