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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023894740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 322aa MW: 36394.3 Da PI: 6.013 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.2 | 2.3e-25 | 135 | 195 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dD ++WrKYGqKe+ ++++prsY+rCt + gC+++k+v+r +edp++ +itY g H+++ XP_023894740.1 135 DDDHAWRKYGQKEILNAKHPRSYFRCTRKydqGCRATKQVQRMEEDPQMYQITYIGVHTCK 195 8**************************998899**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
METTHPWAEG PSTTQKKVIK ELVEGRDFAT QLKSILHKPL EITHDHASPS PSPHELVSKI 60 LRSFTETLSV LTSSCESGEV IHQNLAVSHA DSHCDDPRSD DSGESRKRPT PKDRRGCYKR 120 RKTTQTWAKV SHTTDDDHAW RKYGQKEILN AKHPRSYFRC TRKYDQGCRA TKQVQRMEED 180 PQMYQITYIG VHTCKDTLKA PQIIMEPDPW ETYIVNNPPD SMWGNGKQAD HDQALSSSTT 240 PTIKQESKEE ALSDLTDNLS SLGTDNNNSY LWTDFKDFEL VGPAIMSPNL GSDNGDVVST 300 MYSCKETASH GLDFGDFNFD DI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 122 | RKRPTPKDRRGCYKRRK |
2 | 119 | 146 | KRRKTTQTWAKVSHTTDDDHAWRKYGQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 5e-51 | WRKY family protein |