PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894189.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 499aa MW: 54814.6 Da PI: 7.5636

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894189.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102	3.4e-32	141	198	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k XP_023894189.1 141 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 198 8**************************************.*************85 PP
2	WRKY	106.5	1.4e-33	314	372	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023894189.1 314 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 372 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MKTHMMHGPI GSTNPVTTVF SNTNIFNERN SSCFEFKPHA SSNMVPADLN QQRSEQSVQA 60 QGQCQPQAFA SSPSVKKEMA VSSNELSLAS PGHMVTSGAI VPVEVDTDEP NQRGTSNTGV 120 QASQFDHKGS GPSVIAERPS DDGYNWRKYG QKLVKGSEFP RSYYKCTHPN CEVKKLFERS 180 HDGQITEIIY KGTHDHPKPQ PSRRYTAGAI MAVQEERSDK ALSLNGRDER SGMFGQTSHT 240 VEPNSTPDRS PVAVNDDSLD GGSMPNRIHD EADDDDPFSK RRKMDIGGVD VTSVVKPIRE 300 PRVVVQTLSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC TNAGCPVRKH VERASHDPKA 360 VITTYEGKHN HDVPTARTSS HDIAGPTAVS GPLRIRSEEN DNVSLDLGVG INSAVENRSN 420 EHRQTHHSDI RGSQTHASSS HYNVVQATPV MTYFGVLNTG MSQYGSRGNP SESLNIGIPP 480 LNHSSYPFPQ NMGKILTGP

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MKTHMMHGPI GSTNPVTTVF SNTNIFNERN SSCFEFKPHA SSNMVPADLN QQRSEQSVQA  60
QGQCQPQAFA SSPSVKKEMA VSSNELSLAS PGHMVTSGAI VPVEVDTDEP NQRGTSNTGV  120
QASQFDHKGS GPSVIAERPS DDGYNWRKYG QKLVKGSEFP RSYYKCTHPN CEVKKLFERS  180
HDGQITEIIY KGTHDHPKPQ PSRRYTAGAI MAVQEERSDK ALSLNGRDER SGMFGQTSHT  240
VEPNSTPDRS PVAVNDDSLD GGSMPNRIHD EADDDDPFSK RRKMDIGGVD VTSVVKPIRE  300
PRVVVQTLSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC TNAGCPVRKH VERASHDPKA  360
VITTYEGKHN HDVPTARTSS HDIAGPTAVS GPLRIRSEEN DNVSLDLGVG INSAVENRSN  420
EHRQTHHSDI RGSQTHASSS HYNVVQATPV MTYFGVLNTG MSQYGSRGNP SESLNIGIPP  480
LNHSSYPFPQ NMGKILTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-173	WRKY family protein