PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894179.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 604aa MW: 65513.5 Da PI: 7.9278

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.5e-32	246	303	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k XP_023894179.1 246 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 303 8**************************************.*************85 PP
2	WRKY	106.1	1.8e-33	419	477	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023894179.1 419 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 477 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MELRLLTATT STSTSTSSNN TSSSADVAAP PEDPTRNKET TASASAAAAA AAANAKYRRM 60 SPAKLPISRS TCLTIPPGLS PTSFLESPVL LSNMKAEPSP TTGSFMKTHM MHGPIGSTNP 120 VTTVFSNTNI FNERNSSCFE FKPHASSNMV PADLNQQRSE QSVQAQGQCQ PQAFASSPSV 180 KKEMAVSSNE LSLASPGHMV TSGAIVPVEV DTDEPNQRGT SNTGVQASQF DHKGSGPSVI 240 AERPSDDGYN WRKYGQKLVK GSEFPRSYYK CTHPNCEVKK LFERSHDGQI TEIIYKGTHD 300 HPKPQPSRRY TAGAIMAVQE ERSDKALSLN GRDERSGMFG QTSHTVEPNS TPDRSPVAVN 360 DDSLDGGSMP NRIHDEADDD DPFSKRRKMD IGGVDVTSVV KPIREPRVVV QTLSEVDILD 420 DGYRWRKYGQ KVVRGNPNPR SYYKCTNAGC PVRKHVERAS HDPKAVITTY EGKHNHDVPT 480 ARTSSHDIAG PTAVSGPLRI RSEENDNVSL DLGVGINSAV ENRSNEHRQT HHSDIRGSQT 540 HASSSHYNVV QATPVMTYFG VLNTGMSQYG SRGNPSESLN IGIPPLNHSS YPFPQNMGKI 600 LTGP

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MELRLLTATT STSTSTSSNN TSSSADVAAP PEDPTRNKET TASASAAAAA AAANAKYRRM  60
SPAKLPISRS TCLTIPPGLS PTSFLESPVL LSNMKAEPSP TTGSFMKTHM MHGPIGSTNP  120
VTTVFSNTNI FNERNSSCFE FKPHASSNMV PADLNQQRSE QSVQAQGQCQ PQAFASSPSV  180
KKEMAVSSNE LSLASPGHMV TSGAIVPVEV DTDEPNQRGT SNTGVQASQF DHKGSGPSVI  240
AERPSDDGYN WRKYGQKLVK GSEFPRSYYK CTHPNCEVKK LFERSHDGQI TEIIYKGTHD  300
HPKPQPSRRY TAGAIMAVQE ERSDKALSLN GRDERSGMFG QTSHTVEPNS TPDRSPVAVN  360
DDSLDGGSMP NRIHDEADDD DPFSKRRKMD IGGVDVTSVV KPIREPRVVV QTLSEVDILD  420
DGYRWRKYGQ KVVRGNPNPR SYYKCTNAGC PVRKHVERAS HDPKAVITTY EGKHNHDVPT  480
ARTSSHDIAG PTAVSGPLRI RSEENDNVSL DLGVGINSAV ENRSNEHRQT HHSDIRGSQT  540
HASSSHYNVV QATPVMTYFG VLNTGMSQYG SRGNPSESLN IGIPPLNHSS YPFPQNMGKI  600
LTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein